Provide summary of a cvFilt S3 object
# S3 method for cvFilt
summary(object, cv_threshold = NULL, ...)S3 object of class 'cvFilt' created by
cv_filter.
numeric value greater than 1 and less than the value given by filter_object$CV. CV values above cv_threshold are filtered out. Default value is NULL.
further arguments passed to or from other methods
a summary of the CV values, number of NA values, and non-NA values. If a CV threshold is provided, the biomolecules that would be filtered based on this threshold are reported.
library(pmartRdata)
mypep <- group_designation(omicsData = pep_object, main_effects = "Phenotype")
to_filter <- cv_filter(omicsData = mypep, use_groups = TRUE)
summary(to_filter, cv_threshold = 30)