Provide summary of a customFilt S3 object
# S3 method for class 'customFilt'
summary(object, ...)S3 object of class 'customFilt' created by
custom_filter.
further arguments passed to or from other methods
a summary of the items in e_data, f_data, and e_meta that will be removed as a result of applying the custom filter.
library(pmartRdata)
to_filter <- custom_filter(omicsData = metab_object, e_data_remove = "fumaric acid",
f_data_remove = "Sample_1_Phenotype2_B")
summary(to_filter)
to_filter2 <- custom_filter(omicsData = metab_object,
f_data_keep = metab_object$f_data$SampleID[1:10])
summary(to_filter2)